BLAST results

BLASTX 2.2.4 [Aug-26-2002]
Query= IGU001_0048_B06.f
         (227 letters)

Database: nr-aa 
           1,542,475 sequences; 498,469,568 total letters

Searching..................................................done

                                                                 Score    E

spu:DOMN_DROME DOMON domain containing protein CG14681 precursor...    54   5e-07   Drosophila melanogaster
gp:AE003685_34 [AE003685] gi:7299302  CG6217-PA [Drosophila mela...    42   0.003   Drosophila melanogaster
gpu:BX294140_274 [BX294140] gi:32397877  probable malate permeas...    35   0.32    
gpu:AE016862_105 [AE016862] gi:28852274  conserved hypothetical ...    32   3.5     Pseudomonas syringae pv. tomato str. DC3000


>spu:DOMN_DROME DOMON domain containing protein CG14681
           precursor.>gp:AE003688_3 [AE003688] gi:23170926
           CG31261-PB [Drosophila melanogaster]>gpu:AE003688_3
           [AE003688] gi:23170926  CG32922-PB [Drosophila
           melanogaster]
          Length = 784

 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = +2

Query: 47  AVIWAVGPLSSDNEPTYHKLRNKGDLLIDFGRSPFWNCPAPEDPTATSGS 196
           +V+WA+GPL+   E ++H   NK    I+FGR P WNCP PE     S S
Sbjct: 413 SVVWAIGPLNDYQEVSFHTFYNKHLHQIEFGRQPKWNCPLPEGARGNSNS 462



>gp:AE003685_34 [AE003685] gi:7299302  CG6217-PA [Drosophila
           melanogaster]>gp:AY071192_1 [AY071192] gi:17945523
           RE24065p [Drosophila melanogaster]>gpu:AE003685_35
           [AE003685] gi:7299302  CG6217-PA [Drosophila
           melanogaster]
          Length = 689

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 17/29 (58%), Positives = 21/29 (71%)
 Frame = +2

Query: 50  VIWAVGPLSSDNEPTYHKLRNKGDLLIDF 136
           VIWA GPL S+NEP +H    K D++IDF
Sbjct: 421 VIWAFGPLDSNNEPAFHTYYPKSDIVIDF 449



>gpu:BX294140_274 [BX294140] gi:32397877  probable malate permease
           [Pirellula sp.]
          Length = 343

 Score = 35.0 bits (79), Expect = 0.32
 Identities = 21/53 (39%), Positives = 32/53 (59%)
 Frame = +2

Query: 11  IRARGSSPMEPTAVIWAVGPLSSDNEPTYHKLRNKGDLLIDFGRSPFWNCPAP 169
           IRA G+  + PT+V+ +VG L+S + P    L   G +L+DF R+  W+  AP
Sbjct: 205 IRATGAETLIPTSVMRSVGLLASSSIPL--GLLLSGAILVDFLRAADWSGSAP 255



>gpu:AE016862_105 [AE016862] gi:28852274  conserved hypothetical
           protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 370

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -3

Query: 81  SELSGPTAQMTAVGSIGDDPRARIH 7
           +ELS P AQ+   G +GDDPRA IH
Sbjct: 104 TELSEPVAQLLE-GQLGDDPRANIH 127


  Database: nr-aa
    Posted date:  Jul 23, 2004  4:17 PM
  Number of letters in database: 498,469,568
  Number of sequences in database:  1,542,475
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 220,311,240
Number of Sequences: 1542475
Number of extensions: 3934074
Number of successful extensions: 11565
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11554
length of database: 498,469,568
effective HSP length: 51
effective length of database: 419,803,343
effective search space used: 10075280232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)